BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D01SP1|AL429556
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1712 1681 0.0
>3x_Contig1712
Length = 23668
Score = 1681 bits (846), Expect = 0.0
Identities = 867/876 (98%)
Strand = Plus / Minus
Query: 1 acgttggatcaacgctaaaccaaaaagtaaacctggcctgctcgctccctatgcaacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9435 acgttggatcaacgctaaaccaaaaagtaaacctggcctgctcgctccctatgcaacaac 9376
Query: 61 agcctattgcaaaggtaaatccttaatgaaagchagttttgaaacactaggcgcgatgcc 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 9375 agcctattgcaaaggtaaatccttaatgaaagcaagttttgaaacactaggcgcgatgcc 9316
Query: 121 tggcatttacaagaatgaattctttcccttatttactctcttacgttgagcgttttcgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9315 tggcatttacaagaatgaattctttcccttatttactctcttacgttgagcgttttcgga 9256
Query: 181 tattgtcttcgaaaccattggtatgattttcataaccttgttaaactgcagatcaagcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9255 tattgtcttcgaaaccattggtatgattttcataaccttgttaaactgcagatcaagcga 9196
Query: 241 aaatctcaaacaatgtacaaaaaatgtacaacaatgaggcagcgagatgaaaggaagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9195 aaatctcaaacaatgtacaaaaaatgtacaacaatgaggcagcgagatgaaaggaagttt 9136
Query: 301 gacgaatattcttggtggaaaacttcttccagcattttacatcaaatcaatgacggtttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9135 gacgaatattcttggtggaaaacttcttccagcattttacatcaaatcaatgacggtttc 9076
Query: 361 gattctcgcatatgtttcgtaaattttactccgtactttctttggcagtaccaaagagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9075 gattctcgcatatgtttcgtaaattttactccgtactttctttggcagtaccaaagagac 9016
Query: 421 gcgatgttatgaaactaaaacttgaaaaaaaaaaaaaagaaaggatgcatacttcatatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9015 gcgatgttatgaaactaaaacttgaaaaaaaaaaaaaagaaaggatgcatacttcatatt 8956
Query: 481 aaagaaaaccatgagctttgagaatgtagttcaatgtactgcmagagctttacatcattg 540
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 8955 aaagaaaaccatgagctttgagaatgtagttcaatgtactgcaagagctttacatcattg 8896
Query: 541 aaaaggattgtcatcagttgtcataggggaaatgatagccaaamatcctagtaacgaaga 600
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 8895 aaaaggattgtcatcagttgtcataggggaaatgatagcaaaaaatcctagtaacgaaga 8836
Query: 601 gagaagcttgtttggaggtgcgaaaggcgccactcgagtgggatgtaagagggaacaacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8835 gagaagcttgtttggaggtgcgaaaggcgccactcgagtgggatgtaagagggaacaacc 8776
Query: 661 cgagtgttttacattagagaaaacagtttatacgcagatgatgaatttatgatggatggt 720
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8775 cgagtgttttacattagagaaaacaggttatacgcagatgatgaatttatgatggatggt 8716
Query: 721 agttgctgttattgcagaattcgatcttcgtgccgcctttcatttggtccgatggctaca 780
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |
Sbjct: 8715 agttgctgttattgcagaattcgatcttcgtgccgcctttcatttggtcagatggataaa 8656
Query: 781 actaattaaattaaaacacagctcacacagttctctttgtgggaagttaatccgaaacag 840
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8655 aataattaaattaaaacacagctcacacagttctctttgtgggaagttaatccgaaacag 8596
Query: 841 agaatattccgtcgattgcccctttggattgtcgac 876
||||||||||||||||||||||||||||||||||||
Sbjct: 8595 agaatattccgtcgattgcccctttggattgtcgac 8560
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,144
Number of Sequences: 1807
Number of extensions: 15144
Number of successful extensions: 414
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)